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- Independent Principal Component Analysis for biologically meaningful dimension reduction of large biological data sets
- Markov Chain Ontology Analysis (MCOA)
- Analysis of Energy-based Algorithms for RNA Secondary Structure Prediction
- Fast automatic quantitative cell replication with fluorescent live cell imaging
- TranscriptomeBrowser 3.0 : introducing a new compendium of molecular interactions and a new visualization tool for the study of gene...
- The Virtual Fly Brain browser and query interface
- SNPxGE2: a database for human SNP-coexpression associations
- seeQTL: a searchable database for human eQTLs
- An infrastructure for ontology-based information systems in biomedicine: RICORDO case study
- Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data
- FRET studies of a landscape of Lac repressor-mediated DNA loops
- Functional and structural characterization of the mammalian TREX-2 complex that links transcription with nuclear messenger RNA export
- Picking ChIP-seq peak detectors for analyzing chromatin modification experiments
- Predicting kissing interactions in microRNA-target complex and assessment of microRNA activity
- A subgroup of SGS3-like proteins act redundantly in RNA-directed DNA methylation
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